BEAST v2.5.0 Documentation: beast.core.Logger

Logs results of a calculation processes on regular intervals.

Inputs:

fileName, logEvery, model, mode, sort, sanitiseHeaders, log

 

fileName
type: java.lang.String
Name of the file, or stdout if left blank
Optional input

 

logEvery
type: java.lang.Integer
Number of the samples logged
Optional input. Default: 1

 

model
type: beast.core.BEASTObject
Model to log at the top of the log. If specified, XML will be produced for the model, commented out by # at the start of a line. Alignments are suppressed. This way, the log file documents itself.
Optional input

 

mode
type: beast.core.Logger$LOGMODE
logging mode, one of [autodetect, compound, tree]
Optional input

 

sort
type: beast.core.Logger$SORTMODE
sort items to be logged, one of [none, alphabetic, smart]
Optional input

 

sanitiseHeaders
type: java.lang.Boolean
whether to remove any clutter introduced by Beauti
Optional input. Default: false

 

log
type: beast.core.Loggable***
Element in a log. This can be any plug in that is Loggable.
Required input