|implemented by the following|
BEASTObject that performs calculations based on the State.
Probabilistic representation that can produce a log probability for instance for running an MCMC chain.
Distribution on a tree, typically a prior such as Coalescent or Yule
Species tree prior for *BEAST analysis
Logable: yes, this can be used in a log.
popFunction, bottomPopSize, topPopSize, taxonset, tree, treeIntervals
|Population function. This can be [constant, linear, linear_with_constant_root] (default 'constant')|
|population size parameter for populations at the bottom of a branch. For constant population function, this is the same at the top of the branch.|
|population size parameter at the top of a branch. Ignored for constant population function, but required for linear population function.|
|set of taxa mapping lineages to species|
|tree over which to calculate a prior or likelihood|
|Either this, or treeIntervals needs to be specified|
|Intervals for a phylogenetic beast tree|
|Either this, or tree needs to be specified|