BEAST v2.7.8 Documentation: beastclassic.evolution.substitutionmodel.SVSGeneralSubstitutionModelLogger

SVS General Substitution Model Logger

Logable: yes, this can be used in a log.

Inputs:

model, dataType, useLocationNames

 

model
type: beastclassic.evolution.substitutionmodel.SVSGeneralSubstitutionModel
BSSVS general substitution model.
Required input

 

dataType
type: beast.base.evolution.datatype.UserDataType
User data type for the location data. Used to generate more readable logs.
Required input

 

useLocationNames
type: java.lang.Boolean
When true, use full names of locations in log rather than rate matrix indices.
Optional input. Default: true