BEAST v2.7.8 Documentation: beastclassic.evolution.tree.coalescent.GMRFSkyrideLikelihood

BEASTObject that performs calculations based on the State.
Probabilistic representation that can produce a log probability for instance for running an MCMC chain.
Distribution on a tree, typically a prior such as Coalescent or Yule
A likelihood function for a Gaussian Markov random field on a log population size trajectory

Reference:

Minin, V. N., Bloomquist, E. W., & Suchard, M. A. (2008). Smooth skyride through a rough skyline: Bayesian coalescent-based inference of population dynamics. Molecular biology and evolution, 25(7), 1459-1471.

doi:10.1093/molbev/msn090

Logable: yes, this can be used in a log.

Inputs:

groupSizes, populationSizes, precisionParameter, lambda, timeAwareSmoothing, rescaleByRootHeightInput, tree, treeIntervals