BEAST v2.7.8 Documentation: starbeast3.evolution.branchratemodel.RandomLocalClockModelSB3

Based on RandomLocalClockModel in BEAST v2.4

Inputs:

tree, noCache, rates, indicators, clock.rate

 

tree
type: beast.base.evolution.tree.TreeInterface
(Species) tree to apply per-branch rates to.
Required input

 

noCache
type: java.lang.Boolean
Always recalculate branch rates.
Optional input. Default: false

 

rates
type: beast.base.inference.parameter.RealParameter
Continuous per-branch rates.
Required input

 

indicators
type: beast.base.inference.parameter.BooleanParameter
Indicators associated with nodes in the tree for sampling of individual rate changes among branches.
Required input

 

clock.rate
type: beast.base.core.Function
mean clock rate (defaults to 1.0)
Optional input