Proposes a move in state space.
For internal nodes: propose a new node time
twindowSize, popsizes, proportionalToBranchLength, clock, tree, markclades, gene, kernel, kernelDistribution, weight
| type: java.lang.Double |
| the size of the window when proposing new node time |
| Required input |
| type: beast.base.inference.parameter.RealParameter |
| the constant population sizes associated with nodes in the tree. |
| Optional input |
| type: java.lang.Boolean |
| Set proposal step sizes proportional to branch length (true) or a constant (false) |
| Optional input. Default: false |
| type: starbeast3.evolution.branchratemodel.UCRelaxedClockModelSB3 |
| the relaxed clock model associated with species tree branch rates. If not specified, then rates will not change (eg strict clock) |
| Optional input |
| type: beast.base.evolution.tree.Tree |
| beast.tree on which this operation is performed |
| Optional input |
| type: java.lang.Boolean |
| Mark all ancestors of nodes changed by the operator as changed, up to the MRCA of all nodes changed by the operator. |
| Optional input. Default: false |
| type: starbeast3.evolution.speciation.GeneTreeForSpeciesTreeDistribution*** |
| list of gene trees that constrain species tree movement |
| Optional input |
| type: starbeast3.genekernel.GTKPrior |
| the kernel of gene trees |
| Optional input |
| type: beast.base.inference.operator.kernel.KernelDistribution |
| provides sample distribution for proposals |
| Optional input |
| type: java.lang.Double |
| weight with which this operator is selected |
| Required input |