BEAST v2.7.8 Documentation: treestat2.TreeStat2Logger

BEASTObject that performs calculations based on the State.
Logger to report statistics of a tree

Logable: yes, this can be used in a log.

Inputs:

tree, TreeHeight, SecondInternalNodeHeight, GetTypeChanges, ExternalInternalRatio

 

tree
type: beast.base.evolution.tree.Tree
tree to report statistic for.
Required input

 

TreeHeight
type: java.lang.Boolean
If true, tree height will be logged.
Optional input. Default: false

 

SecondInternalNodeHeight
type: java.lang.Boolean
If true, second internal node height will be logged.
Optional input. Default: false

 

GetTypeChanges
type: java.lang.String
Comma separated types for type changes logging.
Optional input. Default:

 

ExternalInternalRatio
type: java.lang.Boolean
If true, external to internal branch length ratio will be logged.
Optional input. Default: false