| implemented by the following |
| beastlabs.inference.TreeStoreLogger |
| starbeast3.inference.ShortMCMCLogger |
Logs results of a calculation processes on regular intervals.
fileName, logEvery, model, mode, sort, sanitiseHeaders, log, ascii
| type: java.lang.String |
| Name of the file, or stdout if left blank |
| Optional input |
| type: java.lang.Integer |
| Number of the samples logged |
| Optional input. Default: 1 |
| type: beast.base.core.BEASTObject |
| Model to log at the top of the log. If specified, XML will be produced for the model, commented out by # at the start of a line. Alignments are suppressed. This way, the log file documents itself. |
| Optional input |
| type: beast.base.inference.Logger$LOGMODE |
| logging mode, one of [autodetect, compound, tree] |
| Optional input |
| type: beast.base.inference.Logger$SORTMODE |
| sort items to be logged, one of [none, alphabetic, smart] |
| Optional input |
| type: java.lang.Boolean |
| whether to remove any clutter introduced by BEAUti |
| Optional input. Default: false |
| type: beast.base.core.Loggable*** |
| Element in a log. This can be any plug in that is Loggable. |
| Required input |
| type: java.lang.Boolean |
| whether to convert the log output to ASCII |
| Optional input. Default: true |