Proposes a move in state space.
indicator, geneKernelSize, p, max, gene, kernel, kernelDistribution, weight
| type: beast.base.inference.parameter.IntegerParameter |
| A parameter which points each observed gene tree to one in the kernel |
| Required input |
| type: beast.base.inference.parameter.IntegerParameter |
| A parameter which controls the size of the gene kernel |
| Required input |
| type: java.lang.Double |
| The number of trees pointers to change is Binomial distributed, where n = 'num pointers' and p = min('numpointers / kernelsize * p', 'max') |
| Optional input. Default: 1.0 |
| type: java.lang.Double |
| The number of trees pointers to change is Binomial distributed, where n = 'num pointers' and p = min('numpointers / kernelsize * p', 'max') |
| Optional input. Default: 0.95 |
| type: starbeast3.evolution.speciation.GeneTreeForSpeciesTreeDistribution*** |
| list of gene trees that constrain species tree movement |
| Forbidden: must not be specified |
| type: starbeast3.genekernel.GTKPrior |
| the kernel of gene trees |
| Optional input |
| type: beast.base.inference.operator.kernel.KernelDistribution |
| provides sample distribution for proposals |
| Optional input |
| type: java.lang.Double |
| weight with which this operator is selected |
| Required input |