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Random local molecular clock

November 9, 2016 rbou019

The random local molecular clock model is a model of rate heterogeneity across branches that assumes that each branch either inherits it’s parent branch rate, or with probability p, assumes a new rate drawn from a shared rate distribution.

BEAST 2 implementation drummond2010
BEAST 1 implementation drummond2010
Theory drummond2010
Example XML testRandomLocalClock.xml
BEAST2 source code core

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Bayesian evolutionary analysis by sampling trees

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